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|   | \comment This is the source for the FFTW FAQ list, in | |||
|  | \comment the Bizarre Format With No Name.  It is turned into Lout | |||
|  | \comment input, HTML, plain ASCII and an Info document by a Perl script. | |||
|  | \comment | |||
|  | \comment The format and scripts come from the Linux FAQ, by | |||
|  | \comment Ian Jackson. | |||
|  | \set brieftitle FFTW FAQ | |||
|  | \set author     <A href="http://www.fftw.org">Matteo Frigo and Steven G. Johnson</A> / <A href="mailto:fftw@fftw.org">fftw@fftw.org</A> | |||
|  | \set authormail fftw@fftw.org | |||
|  | \set title      FFTW Frequently Asked Questions with Answers | |||
|  | \set copyholder Matteo Frigo and Massachusetts Institute of Technology | |||
|  | \call-html startup html.refs2 | |||
|  | \copyto ASCII | |||
|  |             FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS | |||
|  |                             `date '+%d %h %Y'` | |||
|  | 			     Matteo Frigo | |||
|  | 			   Steven G. Johnson | |||
|  |  			    <fftw@fftw.org> | |||
|  | 
 | |||
|  | \endcopy | |||
|  | \copyto INFO | |||
|  | INFO-DIR-SECTION Development | |||
|  | START-INFO-DIR-ENTRY | |||
|  | * FFTW FAQ: (fftw-faq). FFTW Frequently Asked Questions with Answers. | |||
|  | END-INFO-DIR-ENTRY | |||
|  | 
 | |||
|  |  | |||
|  | File: $prefix.info, Node: Top, Next: Question 1.1, Up: (dir) | |||
|  | 
 | |||
|  |             FFTW FREQUENTLY ASKED QUESTIONS WITH ANSWERS | |||
|  |                             `date '+%d %h %Y'` | |||
|  | 			     Matteo Frigo | |||
|  | 			   Steven G. Johnson | |||
|  | 			    <fftw@fftw.org> | |||
|  | 
 | |||
|  | \endcopy | |||
|  | 
 | |||
|  | This is the list of Frequently Asked Questions about FFTW, a | |||
|  | collection of fast C routines for computing the Discrete Fourier | |||
|  | Transform in one or more dimensions. | |||
|  | 
 | |||
|  | \section  Index | |||
|  | 
 | |||
|  | \index | |||
|  | 
 | |||
|  | \comment ###################################################################### | |||
|  | 
 | |||
|  | \section  Introduction and General Information | |||
|  | 
 | |||
|  | \question 26aug:whatisfftw  What is FFTW? | |||
|  | 
 | |||
|  | FFTW is a free collection of fast C routines for computing the | |||
|  | Discrete Fourier Transform in one or more dimensions.  It includes | |||
|  | complex, real, symmetric, and parallel transforms, and can handle | |||
|  | arbitrary array sizes efficiently.  FFTW is typically faster than | |||
|  | other publically-available FFT implementations, and is even | |||
|  | competitive with vendor-tuned libraries.  (See our web page for | |||
|  | extensive benchmarks.)  To achieve this performance, FFTW uses novel | |||
|  | code-generation and runtime self-optimization techniques (along with | |||
|  | many other tricks). | |||
|  | 
 | |||
|  | \question 26aug:whereisfftw  How do I obtain FFTW? | |||
|  | 
 | |||
|  | FFTW can be found at \docref{the FFTW web page\}.  You can also | |||
|  | retrieve it from \ftpon ftp.fftw.org in \ftpin /pub/fftw. | |||
|  | 
 | |||
|  | \question 26aug:isfftwfree  Is FFTW free software? | |||
|  | 
 | |||
|  | Starting with version 1.3, FFTW is Free Software in the technical | |||
|  | sense defined by the Free Software Foundation (see \docref{Categories | |||
|  | of Free and Non-Free Software\}), and is distributed under the terms | |||
|  | of the GNU General Public License.  Previous versions of FFTW were | |||
|  | distributed without fee for noncommercial use, but were not | |||
|  | technically ``free.'' | |||
|  | 
 | |||
|  | Non-free licenses for FFTW are also available that permit different | |||
|  | terms of use than the GPL. | |||
|  | 
 | |||
|  | \question 10apr:nonfree  What is this about non-free licenses? | |||
|  | 
 | |||
|  | The non-free licenses are for companies that wish to use FFTW in their | |||
|  | products but are unwilling to release their software under the GPL | |||
|  | (which would require them to release source code and allow free | |||
|  | redistribution).  Such users can purchase an unlimited-use license | |||
|  | from MIT.  Contact us for more details. | |||
|  | 
 | |||
|  | We could instead have released FFTW under the LGPL, or even disallowed | |||
|  | non-Free usage.  Suffice it to say, however, that MIT owns the | |||
|  | copyright to FFTW and they only let us GPL it because we convinced | |||
|  | them that it would neither affect their licensing revenue nor irritate | |||
|  | existing licensees. | |||
|  | 
 | |||
|  | \question 24oct:west In the West? I thought MIT was in the East? | |||
|  | 
 | |||
|  | Not to an Italian.  You could say that we're a Spaghetti Western | |||
|  | (with apologies to Sergio Leone). | |||
|  | 
 | |||
|  | \comment ###################################################################### | |||
|  | 
 | |||
|  | \section  Installing FFTW | |||
|  | 
 | |||
|  | \question 26aug:systems  Which systems does FFTW run on? | |||
|  | 
 | |||
|  | FFTW is written in ANSI C, and should work on any system with a decent | |||
|  | C compiler.  (See also \qref runOnWindows, \qref compilerCrashes.) | |||
|  | FFTW can also take advantage of certain hardware-specific features, | |||
|  | such as cycle counters and SIMD instructions, but this is optional. | |||
|  | 
 | |||
|  | \question 26aug:runOnWindows  Does FFTW run on Windows? | |||
|  | 
 | |||
|  | Yes, many people have reported successfully using FFTW on Windows with | |||
|  | various compilers.  FFTW was not developed on Windows, but the source | |||
|  | code is essentially straight ANSI C.  See also the \docref{FFTW | |||
|  | Windows installation notes\}, \qref compilerCrashes, and \qref | |||
|  | vbetalia. | |||
|  | 
 | |||
|  | \question 26aug:compilerCrashes  My compiler has trouble with FFTW. | |||
|  | 
 | |||
|  | Complain fiercely to the vendor of the compiler.  | |||
|  | 
 | |||
|  | We have successfully used \courier{gcc\} 3.2.x on x86 and PPC, a | |||
|  | recent Compaq C compiler for Alpha, version 6 of IBM's \courier{xlc\} | |||
|  | compiler for AIX, Intel's \courier{icc\} versions 5-7, and Sun | |||
|  | WorkShop \courier{cc\} version 6.   | |||
|  | 
 | |||
|  | FFTW is likely to push compilers to their limits, however, and several | |||
|  | compiler bugs have been exposed by FFTW.  A partial list follows. | |||
|  | 
 | |||
|  | \courier{gcc\} 2.95.x for Solaris/SPARC produces incorrect code for | |||
|  | the test program (workaround: recompile the \courier{libbench2\} | |||
|  | directory with \courier{-O2\}). | |||
|  | 
 | |||
|  | NetBSD/macppc 1.6 comes with a \courier{gcc\} version that also | |||
|  | miscompiles the test program. (Please report a workaround if you know | |||
|  | one.) | |||
|  | 
 | |||
|  | \courier{gcc\} 3.2.3 for ARM reportedly crashes during compilation. | |||
|  | This bug is reportedly fixed in later versions of \courier{gcc\}. | |||
|  | 
 | |||
|  | Versions 8.0 and 8.1 of Intel's \courier{icc\} falsely claim to be | |||
|  | \courier{gcc\}, so you should specify \courier{CC="icc -no-gcc"\}; | |||
|  | this is automatic in FFTW 3.1.  \courier{icc-8.0.066\} reportely | |||
|  | produces incorrect code for FFTW 2.1.5, but is fixed in version 8.1. | |||
|  | \courier{icc-7.1\} compiler build 20030402Z appears to produce | |||
|  | incorrect dependencies, causing the compilation to fail. | |||
|  | \courier{icc-7.1\} build 20030307Z appears to work fine.  (Use | |||
|  | \courier{icc -V\} to check which build you have.)  As of 2003/04/18, | |||
|  | build 20030402Z appears not to be available any longer on Intel's | |||
|  | website, whereas the older build 20030307Z is available. | |||
|  | 
 | |||
|  | \courier{ranlib\} of GNU \courier{binutils\} 2.9.1 on Irix has been | |||
|  | observed to corrupt the FFTW libraries, causing a link failure when | |||
|  | FFTW is compiled.  Since \courier{ranlib\} is completely superfluous | |||
|  | on Irix, we suggest deleting it from your system and replacing it with | |||
|  | a symbolic link to \courier{/bin/echo\}. | |||
|  | 
 | |||
|  | If support for SIMD instructions is enabled in FFTW, further compiler | |||
|  | problems may appear: | |||
|  | 
 | |||
|  | \courier{gcc\} 3.4.[0123] for x86 produces incorrect SSE2 code for | |||
|  | FFTW when \courier{-O2\} (the best choice for FFTW) is used, causing | |||
|  | FFTW to crash (\courier{make check\} crashes).  This bug is fixed in | |||
|  | \courier{gcc\} 3.4.4.  On x86_64 (amd64/em64t), \courier{gcc\} 3.4.4 | |||
|  | reportedly still has a similar problem, but this is fixed as of | |||
|  | \courier{gcc\} 3.4.6. | |||
|  | 
 | |||
|  | \courier{gcc-3.2\} for x86 produces incorrect SIMD code if | |||
|  | \courier{-O3\} is used.  The same compiler produces incorrect SIMD | |||
|  | code if no optimization is used, too.  When using \courier{gcc-3.2\}, | |||
|  | it is a good idea not to change the default \courier{CFLAGS\} selected | |||
|  | by the \courier{configure\} script. | |||
|  | 
 | |||
|  | Some 3.0.x and 3.1.x versions of \courier{gcc\} on \courier{x86\} may | |||
|  | crash.  \courier{gcc\} so-called 2.96 shipping with RedHat 7.3 crashes | |||
|  | when compiling SIMD code.  In both cases, please upgrade to | |||
|  | \courier{gcc-3.2\} or later. | |||
|  | 
 | |||
|  | Intel's \courier{icc\} 6.0 misaligns SSE constants, but FFTW has a | |||
|  | workaround. \courier{icc\} 8.x fails to compile FFTW 3.0.x because it | |||
|  | falsely claims to be \courier{gcc\}; we believe this to be a bug in | |||
|  | \courier{icc\}, but FFTW 3.1 has a workaround. | |||
|  | 
 | |||
|  | Visual C++ 2003 reportedly produces incorrect code for SSE/SSE2 when | |||
|  | compiling FFTW.  This bug was reportedly fixed in VC++ 2005; | |||
|  | alternatively, you could switch to the Intel compiler. VC++ 6.0 also | |||
|  | reportedly produces incorrect code for the file | |||
|  | \courier{reodft11e-r2hc-odd.c\} unless optimizations are disabled for | |||
|  | that file. | |||
|  | 
 | |||
|  | \courier{gcc\} 2.95 on MacOS X miscompiles AltiVec code (fixed in | |||
|  | later versions).  \courier{gcc\} 3.2.x miscompiles AltiVec | |||
|  | permutations, but FFTW has a workaround.  \courier{gcc\} 4.0.1 on | |||
|  | MacOS for Intel crashes when compiling FFTW; a workaround is to | |||
|  | compile one file without optimization: \courier{cd kernel; make | |||
|  | CFLAGS=" " trig.lo\}. | |||
|  | 
 | |||
|  | \courier{gcc\} 4.1.1 reportedly crashes when compiling FFTW for MIPS; | |||
|  | the workaround is to compile the file it crashes on | |||
|  | (\courier{t2_64.c\}) with a lower optimization level. | |||
|  | 
 | |||
|  | \courier{gcc\} versions 4.1.2 to 4.2.0 for x86 reportedly miscompile | |||
|  | FFTW 3.1's test program, causing \courier{make check\} to crash | |||
|  | (\courier{gcc\} bug #26528).  The bug was reportedly fixed in | |||
|  | \courier{gcc\} version 4.2.1 and later.  A workaround is to compile | |||
|  | \courier{libbench2/verify-lib.c\} without optimization. | |||
|  | 
 | |||
|  | \question 26aug:solarisSucks FFTW does not compile on Solaris, complaining about \courier{const\}. | |||
|  | 
 | |||
|  | We know that at least on Solaris 2.5.x with Sun's compilers 4.2 you | |||
|  | might get error messages from \courier{make\} such as | |||
|  | 
 | |||
|  | \courier{"./fftw.h", line 88: warning: const is a keyword in ANSI C\} | |||
|  | 
 | |||
|  | This is the case when the \courier{configure\} script reports that | |||
|  | \courier{const\} does not work: | |||
|  | 
 | |||
|  | \courier{checking for working const... (cached) no\} | |||
|  | 
 | |||
|  | You should be aware that Solaris comes with two compilers, namely, | |||
|  | \courier{/opt/SUNWspro/SC4.2/bin/cc\} and \courier{/usr/ucb/cc\}.  The | |||
|  | latter compiler is non-ANSI.  Indeed, it is a perverse shell script | |||
|  | that calls the real compiler in non-ANSI mode.  In order | |||
|  | to compile FFTW, change your path so that the right \courier{cc\} | |||
|  | is used. | |||
|  | 
 | |||
|  | To know whether your compiler is the right one,  type | |||
|  | \courier{cc -V\}.  If the compiler prints ``\courier{ucbcc\}'', | |||
|  | as in  | |||
|  | 
 | |||
|  | \courier{ucbcc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\} | |||
|  | 
 | |||
|  | then the compiler is wrong.  The right message is something like | |||
|  | 
 | |||
|  | \courier{cc: WorkShop Compilers 4.2 30 Oct 1996 C 4.2\} | |||
|  | 
 | |||
|  | \question 19mar:3dnow  What's the difference between \courier{--enable-3dnow\} and \courier{--enable-k7\}? | |||
|  | 
 | |||
|  | \courier{--enable-k7\} enables 3DNow! instructions on K7 processors | |||
|  | (AMD Athlon and its variants).  K7 support is provided by assembly | |||
|  | routines generated by a special purpose compiler. | |||
|  | As of fftw-3.2, --enable-k7 is no longer supported. | |||
|  | 
 | |||
|  | \courier{--enable-3dnow\} enables generic 3DNow! support using | |||
|  | \courier{gcc\} builtin functions.  This works on earlier AMD | |||
|  | processors, but it is not as fast as our special assembly routines. | |||
|  | As of fftw-3.1, --enable-3dnow is no longer supported. | |||
|  | 
 | |||
|  | \question 18apr:fma What's the difference between the fma and the non-fma versions? | |||
|  | 
 | |||
|  | The fma version tries to exploit the fused multiply-add instructions | |||
|  | implemented in many processors such as PowerPC, ia-64, and MIPS.  The | |||
|  | two FFTW packages are otherwise identical.  In FFTW 3.1, the fma and | |||
|  | non-fma versions were merged together into a single package, and the | |||
|  | \courier{configure\} script attempts to automatically guess which | |||
|  | version to use.   | |||
|  | 
 | |||
|  | The FFTW 3.1 \courier{configure\} script enables fma by default on | |||
|  | PowerPC, Itanium, and PA-RISC, and disables it otherwise.  You can | |||
|  | force one or the other by using the \courier{--enable-fma\} or | |||
|  | \courier{--disable-fma\} flag for \courier{configure\}. | |||
|  | 
 | |||
|  | Definitely use fma if you have a PowerPC-based system with | |||
|  | \courier{gcc\} (or IBM \courier{xlc\}).  This includes all GNU/Linux | |||
|  | systems for PowerPC and the older PowerPC-based MacOS systems.  Also | |||
|  | use it on PA-RISC and Itanium with the HP/UX compiler. | |||
|  | 
 | |||
|  | Definitely do not use the fma version if you have an ia-32 processor | |||
|  | (Intel, AMD, MacOS on Intel, etcetera). | |||
|  | 
 | |||
|  | For other architectures/compilers, the situation is not so clear.  For | |||
|  | example, ia-64 has the fma instruction, but \courier{gcc-3.2\} appears | |||
|  | not to exploit it correctly.  Other compilers may do the right thing, | |||
|  | but we have not tried them.  Please send us your feedback so that we | |||
|  | can update this FAQ entry. | |||
|  | 
 | |||
|  | \question 26aug:languages  Which language is FFTW written in? | |||
|  | 
 | |||
|  | FFTW is written in ANSI C.  Most of the code, however, was | |||
|  | automatically generated by a program called \courier{genfft\}, written | |||
|  | in the Objective Caml dialect of ML.  You do not need to know ML or to | |||
|  | have an Objective Caml compiler in order to use FFTW. | |||
|  | 
 | |||
|  | \courier{genfft\} is provided with the FFTW sources, which means that | |||
|  | you can play with the code generator if you want.  In this case, you | |||
|  | need a working Objective Caml system.  Objective Caml is available | |||
|  | from \docref{the Caml web page\}. | |||
|  | 
 | |||
|  | \question 26aug:fortran  Can I call FFTW from Fortran? | |||
|  | 
 | |||
|  | Yes, FFTW (versions 1.3 and higher) contains a Fortran-callable | |||
|  | interface, documented in the FFTW manual. | |||
|  | 
 | |||
|  | By default, FFTW configures its Fortran interface to work with the | |||
|  | first compiler it finds, e.g. \courier{g77\}.  To configure for a | |||
|  | different, incompatible Fortran compiler \courier{foobar\}, use | |||
|  | \courier{./configure F77=foobar\} when installing FFTW.  (In the case | |||
|  | of \courier{g77\}, however, FFTW 3.x also includes an extra set of | |||
|  | Fortran-callable routines with one less underscore at the end of | |||
|  | identifiers, which should cover most other Fortran compilers on Linux | |||
|  | at least.) | |||
|  | 
 | |||
|  | \question 26aug:cplusplus  Can I call FFTW from C++? | |||
|  | 
 | |||
|  | Most definitely.  FFTW should compile and/or link under any C++ | |||
|  | compiler.  Moreover, it is likely that the C++ \courier{<complex>\} | |||
|  | template class is bit-compatible with FFTW's complex-number format | |||
|  | (see the FFTW manual for more details). | |||
|  | 
 | |||
|  | \question 26aug:whynotfortran  Why isn't FFTW written in Fortran/C++? | |||
|  | 
 | |||
|  | Because we don't like those languages, and neither approaches the | |||
|  | portability of C. | |||
|  | 
 | |||
|  | \question 29mar:singleprec How do I compile FFTW to run in single precision? | |||
|  | 
 | |||
|  | On a Unix system: \courier{configure --enable-float\}.  On a non-Unix | |||
|  | system: edit \courier{config.h\} to \courier{#define\} the symbol | |||
|  | \courier{FFTW_SINGLE\} (for FFTW 3.x).  In both cases, you must then | |||
|  | recompile FFTW.  In FFTW 3, all FFTW identifiers will then begin with | |||
|  | \courier{fftwf_\} instead of \courier{fftw_\}. | |||
|  | 
 | |||
|  | \question 28mar:64bitk7 --enable-k7 does not work on x86-64 | |||
|  | 
 | |||
|  | Support for --enable-k7 was discontinued in fftw-3.2. | |||
|  | 
 | |||
|  | The fftw-3.1 release supports --enable-k7.  This option only works on | |||
|  | 32-bit x86 machines that implement 3DNow!, including the AMD Athlon | |||
|  | and the AMD Opteron in 32-bit mode.  --enable-k7 does not work on AMD | |||
|  | Opteron in 64-bit mode.  Use --enable-sse for x86-64 machines. | |||
|  | 
 | |||
|  | FFTW supports 3DNow! by means of assembly code generated by a | |||
|  | special-purpose compiler.  It is hard to produce assembly code that | |||
|  | works in both 32-bit and 64-bit mode. | |||
|  | 
 | |||
|  | \comment ###################################################################### | |||
|  | 
 | |||
|  | \section  Using FFTW | |||
|  | 
 | |||
|  | \question 15mar:fftw2to3 Why not support the FFTW 2 interface in FFTW 3? | |||
|  | 
 | |||
|  | FFTW 3 has semantics incompatible with earlier versions: its plans can | |||
|  | only be used for a given stride, multiplicity, and other | |||
|  | characteristics of the input and output arrays; these stronger | |||
|  | semantics are necessary for performance reasons.  Thus, it is | |||
|  | impossible to efficiently emulate the older interface (whose plans can | |||
|  | be used for any transform of the same size).  We believe that it | |||
|  | should be possible to upgrade most programs without any difficulty, | |||
|  | however. | |||
|  | 
 | |||
|  | \question 20mar:planperarray Why do FFTW 3 plans encapsulate the input/output arrays and not just the algorithm? | |||
|  | 
 | |||
|  | There are several reasons: | |||
|  | 
 | |||
|  | \call startlist | |||
|  | \call item | |||
|  | It was important for performance reasons that the plan be specific to | |||
|  | array characteristics like the stride (and alignment, for SIMD), and | |||
|  | requiring that the user maintain these invariants is error prone. | |||
|  | \call item | |||
|  | In most high-performance applications, as far as we can tell, you are | |||
|  | usually transforming the same array over and over, so FFTW's semantics | |||
|  | should not be a burden. | |||
|  | \call item | |||
|  | If you need to transform another array of the same size, creating a | |||
|  | new plan once the first exists is a cheap operation. | |||
|  | \call item | |||
|  | If you need to transform many arrays of the same size at once, you | |||
|  | should really use the \courier{plan_many\} routines in FFTW's "advanced" | |||
|  | interface. | |||
|  | \call item | |||
|  | If the abovementioned array characteristics are the same, you are | |||
|  | willing to pay close attention to the documentation, and you really | |||
|  | need to, we provide a "new-array execution" interface to apply a plan | |||
|  | to a new array. | |||
|  | \call endlist | |||
|  | 
 | |||
|  | \question 25may:slow FFTW seems really slow. | |||
|  | 
 | |||
|  | You are probably recreating the plan before every transform, rather | |||
|  | than creating it once and reusing it for all transforms of the same | |||
|  | size.  FFTW is designed to be used in the following way: | |||
|  | 
 | |||
|  | \call startlist | |||
|  | \call item | |||
|  | First, you create a plan.  This will take several seconds. | |||
|  | \call item | |||
|  | Then, you reuse the plan many times to perform FFTs.  These are fast. | |||
|  | \call endlist | |||
|  | 
 | |||
|  | If you don't need to compute many transforms and the time for the | |||
|  | planner is significant, you have two options.  First, you can use the | |||
|  | \courier{FFTW_ESTIMATE\} option in the planner, which uses heuristics | |||
|  | instead of runtime measurements and produces a good plan in a short | |||
|  | time.  Second, you can use the wisdom feature to precompute the plan; | |||
|  | see \qref savePlans | |||
|  | 
 | |||
|  | \question 22oct:slows FFTW slows down after repeated calls. | |||
|  | 
 | |||
|  | Probably, NaNs or similar are creeping into your data, and the | |||
|  | slowdown is due to the resulting floating-point exceptions.  For | |||
|  | example, be aware that repeatedly FFTing the same array is a diverging | |||
|  | process (because FFTW computes the unnormalized transform). | |||
|  | 
 | |||
|  | \question 22oct:segfault An FFTW routine is crashing when I call it. | |||
|  | 
 | |||
|  | Did the FFTW test programs pass (\courier{make check\}, or \courier{cd | |||
|  | tests; make bigcheck\} if you want to be paranoid)?  If so, you almost | |||
|  | certainly have a bug in your own code.  For example, you could be | |||
|  | passing invalid arguments (such as wrongly-sized arrays) to FFTW, or | |||
|  | you could simply have memory corruption elsewhere in your program that | |||
|  | causes random crashes later on.  Please don't complain to us unless | |||
|  | you can come up with a minimal self-contained program (preferably | |||
|  | under 30 lines) that illustrates the problem. | |||
|  | 
 | |||
|  | \question 22oct:fortran64 My Fortran program crashes when calling FFTW. | |||
|  | 
 | |||
|  | As described in the manual, on 64-bit machines you must store the | |||
|  | plans in variables large enough to hold a pointer, for example | |||
|  | \courier{integer*8\}.  We recommend using \courier{integer*8\} on | |||
|  | 32-bit machines as well, to simplify porting. | |||
|  | 
 | |||
|  | \question 24mar:conventions FFTW gives results different from my old FFT. | |||
|  | 
 | |||
|  | People follow many different conventions for the DFT, and you should | |||
|  | be sure to know the ones that we use (described in the FFTW manual). | |||
|  | In particular, you should be aware that the | |||
|  | \courier{FFTW_FORWARD\}/\courier{FFTW_BACKWARD\} directions correspond | |||
|  | to signs of -1/+1 in the exponent of the DFT definition. | |||
|  | (\italic{Numerical Recipes\} uses the opposite convention.)   | |||
|  | 
 | |||
|  | You should also know that we compute an unnormalized transform.  In | |||
|  | contrast, Matlab is an example of program that computes a normalized | |||
|  | transform.  See \qref whyscaled. | |||
|  | 
 | |||
|  | Finally, note that floating-point arithmetic is not exact, so | |||
|  | different FFT algorithms will give slightly different results (on the | |||
|  | order of the numerical accuracy; typically a fractional difference of | |||
|  | 1e-15 or so in double precision). | |||
|  | 
 | |||
|  | \question 31aug:nondeterministic FFTW gives different results between runs | |||
|  | 
 | |||
|  | If you use \courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} mode, | |||
|  | then the algorithm FFTW employs is not deterministic: it depends on | |||
|  | runtime performance measurements.  This will cause the results to vary | |||
|  | slightly from run to run.  However, the differences should be slight, | |||
|  | on the order of the floating-point precision, and therefore should | |||
|  | have no practical impact on most applications. | |||
|  | 
 | |||
|  | If you use saved plans (wisdom) or \courier{FFTW_ESTIMATE\} mode, | |||
|  | however, then the algorithm is deterministic and the results should be | |||
|  | identical between runs. | |||
|  | 
 | |||
|  | \question 26aug:savePlans Can I save FFTW's plans? | |||
|  | 
 | |||
|  | Yes. Starting with version 1.2, FFTW provides the \courier{wisdom\} | |||
|  | mechanism for saving plans; see the FFTW manual. | |||
|  | 
 | |||
|  | \question 14sep:whyscaled Why does your inverse transform return a scaled result? | |||
|  | 
 | |||
|  | Computing the forward transform followed by the backward transform (or | |||
|  | vice versa) yields the original array scaled by the size of the array. | |||
|  | (For multi-dimensional transforms, the size of the array is the | |||
|  | product of the dimensions.)  We could, instead, have chosen a | |||
|  | normalization that would have returned the unscaled array. Or, to | |||
|  | accomodate the many conventions in this matter, the transform routines | |||
|  | could have accepted a "scale factor" parameter. We did not do this, | |||
|  | however, for two reasons. First, we didn't want to sacrifice | |||
|  | performance in the common case where the scale factor is 1. Second, in | |||
|  | real applications the FFT is followed or preceded by some computation | |||
|  | on the data, into which the scale factor can typically be absorbed at | |||
|  | little or no cost. | |||
|  | 
 | |||
|  | \question 02dec:centerorigin How can I make FFTW put the origin (zero frequency) at the center of its output? | |||
|  | 
 | |||
|  | For human viewing of a spectrum, it is often convenient to put the | |||
|  | origin in frequency space at the center of the output array, rather | |||
|  | than in the zero-th element (the default in FFTW).  If all of the | |||
|  | dimensions of your array are even, you can accomplish this by simply | |||
|  | multiplying each element of the input array by (-1)^(i + j + ...), | |||
|  | where i, j, etcetera are the indices of the element.  (This trick is a | |||
|  | general property of the DFT, and is not specific to FFTW.) | |||
|  | 
 | |||
|  | \question 08may:imageaudio How do I FFT an image/audio file in \italic{foobar\} format? | |||
|  | 
 | |||
|  | FFTW performs an FFT on an array of floating-point values.  You can | |||
|  | certainly use it to compute the transform of an image or audio stream, | |||
|  | but you are responsible for figuring out your data format and | |||
|  | converting it to the form FFTW requires. | |||
|  | 
 | |||
|  | \question 09apr:linkfails My program does not link (on Unix). | |||
|  | 
 | |||
|  | The libraries must be listed in the correct order (\courier{-lfftw3 | |||
|  | -lm\} for FFTW 3.x) and \italic{after\} your program sources/objects. | |||
|  | (The general rule is that if \italic{A\} uses \italic{B\}, then | |||
|  | \italic{A\} must be listed before \italic{B\} in the link command.). | |||
|  | 
 | |||
|  | \question 15mar:linkheader I included your header, but linking still fails. | |||
|  | 
 | |||
|  | You're a C++ programmer, aren't you?  You have to compile the FFTW | |||
|  | library and link it into your program, not just \courier{#include | |||
|  | <fftw3.h>\}.  (Yes, this is really a FAQ.) | |||
|  | 
 | |||
|  | \question 22oct:nostack My program crashes, complaining about stack space. | |||
|  | 
 | |||
|  | You cannot declare large arrays with automatic storage (e.g. via | |||
|  | \courier{fftw_complex array[N]\}); you should use | |||
|  | \courier{fftw_malloc\} (or equivalent) to allocate the arrays you want | |||
|  | to transform if they are larger than a few hundred elements. | |||
|  | 
 | |||
|  | \question 13may:leaks FFTW seems to have a memory leak. | |||
|  | 
 | |||
|  | After you create a plan, FFTW caches the information required to | |||
|  | quickly recreate the plan.  (See \qref savePlans) It also maintains a | |||
|  | small amount of other persistent memory.  You can deallocate all of | |||
|  | FFTW's internally allocated memory, if you wish, by calling | |||
|  | \courier{fftw_cleanup()\}, as documented in the manual. | |||
|  | 
 | |||
|  | \question 16may:allzero The output of FFTW's transform is all zeros. | |||
|  | 
 | |||
|  | You should initialize your input array \italic{after\} creating the | |||
|  | plan, unless you use \courier{FFTW_ESTIMATE\}: planning with | |||
|  | \courier{FFTW_MEASURE\} or \courier{FFTW_PATIENT\} overwrites the | |||
|  | input/output arrays, as described in the manual. | |||
|  | 
 | |||
|  | \question 05sep:vbetalia How do I call FFTW from the Microsoft language du jour? | |||
|  | 
 | |||
|  | Please \italic{do not\} ask us Windows-specific questions.  We do not | |||
|  | use Windows.  We know nothing about Visual Basic, Visual C++, or .NET. | |||
|  | Please find the appropriate Usenet discussion group and ask your | |||
|  | question there.  See also \qref runOnWindows. | |||
|  | 
 | |||
|  | \question 15oct:pruned Can I compute only a subset of the DFT outputs? | |||
|  | 
 | |||
|  | In general, no, an FFT intrinsically computes all outputs from all | |||
|  | inputs.  In principle, there is something called a \italic{pruned | |||
|  | FFT\} that can do what you want, but to compute K outputs out of N the | |||
|  | complexity is in general O(N log K) instead of O(N log N), thus saving | |||
|  | only a small additive factor in the log.  (The same argument holds if | |||
|  | you instead have only K nonzero inputs.) | |||
|  | 
 | |||
|  | There are some specific cases in which you can get the O(N log K) | |||
|  | performance benefits easily, however, by combining a few ordinary | |||
|  | FFTs.  In particular, the case where you want the first K outputs, | |||
|  | where K divides N, can be handled by performing N/K transforms of size | |||
|  | K and then summing the outputs multiplied by appropriate phase | |||
|  | factors.  For more details, see \docref{pruned FFTs with FFTW\}. | |||
|  | 
 | |||
|  | There are also some algorithms that compute pruned transforms | |||
|  | \italic{approximately\}, but they are beyond the scope of this FAQ. | |||
|  | 
 | |||
|  | \question 21jan:transpose  Can I use FFTW's routines for in-place and out-of-place matrix transposition? | |||
|  | 
 | |||
|  | You can use the FFTW guru interface to create a rank-0 transform of | |||
|  | vector rank 2 where the vector strides are transposed.  (A rank-0 | |||
|  | transform is equivalent to a 1D transform of size 1, which.  just | |||
|  | copies the input into the output.)  Specifying the same location for | |||
|  | the input and output makes the transpose in-place. | |||
|  | 
 | |||
|  | For double-valued data stored in row-major format, plan creation looks like | |||
|  | this: | |||
|  | 
 | |||
|  | \verbatim | |||
|  | fftw_plan plan_transpose(int rows, int cols, double *in, double *out) | |||
|  | { | |||
|  |     const unsigned flags = FFTW_ESTIMATE; /* other flags are possible */ | |||
|  |     fftw_iodim howmany_dims[2]; | |||
|  | 
 | |||
|  |     howmany_dims[0].n  = rows; | |||
|  |     howmany_dims[0].is = cols; | |||
|  |     howmany_dims[0].os = 1; | |||
|  | 
 | |||
|  |     howmany_dims[1].n  = cols; | |||
|  |     howmany_dims[1].is = 1; | |||
|  |     howmany_dims[1].os = rows; | |||
|  | 
 | |||
|  |     return fftw_plan_guru_r2r(/*rank=*/ 0, /*dims=*/ NULL, | |||
|  |                               /*howmany_rank=*/ 2, howmany_dims, | |||
|  |                               in, out, /*kind=*/ NULL, flags); | |||
|  | } | |||
|  | \endverbatim | |||
|  | 
 | |||
|  | (This entry was written by Rhys Ulerich.) | |||
|  | 
 | |||
|  | \comment ###################################################################### | |||
|  | 
 | |||
|  | \section  Internals of FFTW | |||
|  | 
 | |||
|  | \question 26aug:howworks  How does FFTW work? | |||
|  | 
 | |||
|  | The innovation (if it can be so called) in FFTW consists in having a | |||
|  | variety of composable \italic{solvers\}, representing different FFT | |||
|  | algorithms and implementation strategies, whose combination into a | |||
|  | particular \italic{plan\} for a given size can be determined at | |||
|  | runtime according to the characteristics of your machine/compiler. | |||
|  | This peculiar software architecture allows FFTW to adapt itself to | |||
|  | almost any machine. | |||
|  | 
 | |||
|  | For more details (albeit somewhat outdated), see the paper "FFTW: An | |||
|  | Adaptive Software Architecture for the FFT", by M. Frigo and | |||
|  | S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998), also | |||
|  | available at \docref{the FFTW web page\}. | |||
|  | 
 | |||
|  | \question 26aug:whyfast Why is FFTW so fast? | |||
|  | 
 | |||
|  | This is a complex question, and there is no simple answer.  In fact, | |||
|  | the authors do not fully know the answer, either.  In addition to many | |||
|  | small performance hacks throughout FFTW, there are three general | |||
|  | reasons for FFTW's speed. | |||
|  | 
 | |||
|  | \call startlist | |||
|  | \call item | |||
|  | 	FFTW uses a variety of FFT algorithms and implementation styles | |||
|  | that can be arbitrarily composed to adapt itself to | |||
|  | a machine.  See \qref howworks. | |||
|  | \call item | |||
|  | 	FFTW uses a code generator to produce highly-optimized | |||
|  | routines for computing small transforms. | |||
|  | \call item | |||
|  | 	FFTW uses explicit divide-and-conquer to take advantage | |||
|  | of the memory hierarchy. | |||
|  | \call endlist | |||
|  | 
 | |||
|  | For more details (albeit somewhat outdated), see the paper "FFTW: An | |||
|  | Adaptive Software Architecture for the FFT", by M. Frigo and | |||
|  | S. G. Johnson, \italic{Proc. ICASSP\} 3, 1381 (1998), | |||
|  | available along with other references at \docref{the FFTW web page\}. | |||
|  | 
 | |||
|  | \comment ###################################################################### | |||
|  | 
 | |||
|  | \section  Known bugs | |||
|  | 
 | |||
|  | \question 27aug:rfftwndbug  FFTW 1.1 crashes in rfftwnd on Linux. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 1.2.  There was a bug in \courier{rfftwnd\} | |||
|  | causing an incorrect amount of memory to be allocated.  The bug showed | |||
|  | up in Linux with libc-5.3.12 (and nowhere else that we know of). | |||
|  | 
 | |||
|  | \question 15oct:fftwmpibug The MPI transforms in FFTW 1.2 give incorrect results/leak memory. | |||
|  | 
 | |||
|  | These bugs were corrected in FFTW 1.2.1.  The MPI transforms (really, | |||
|  | just the transpose routines) in FFTW 1.2 had bugs that could cause | |||
|  | errors in some situations. | |||
|  | 
 | |||
|  | \question 05nov:testsingbug The test programs in FFTW 1.2.1 fail when I change FFTW to use single precision. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 1.3.  (Older versions of FFTW did | |||
|  | work in single precision, but the test programs didn't--the error | |||
|  | tolerances in the tests were set for double precision.) | |||
|  | 
 | |||
|  | \question 24mar:teststoobig The test program in FFTW 1.2.1 fails for n > 46340. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 1.3.  FFTW 1.2.1 produced the right answer, | |||
|  | but the test program was wrong.  For large n, n*n in the naive | |||
|  | transform that we used for comparison overflows 32 bit integer | |||
|  | precision, breaking the test. | |||
|  | 
 | |||
|  | \question 24aug:linuxthreads The threaded code fails on Linux Redhat 5.0 | |||
|  | 
 | |||
|  | We had problems with glibc-2.0.5.  The code should work with | |||
|  | glibc-2.0.7. | |||
|  | 
 | |||
|  | \question 26sep:bigrfftwnd FFTW 2.0's rfftwnd fails for rank > 1 transforms with a final dimension >= 65536. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 2.0.1.  (There was a 32-bit integer overflow due | |||
|  | to a poorly-parenthesized expression.) | |||
|  | 
 | |||
|  | \question 26mar:primebug FFTW 2.0's complex transforms give the wrong results with prime factors 17 to 97. | |||
|  | 
 | |||
|  | There was a bug in the complex transforms that could cause incorrect | |||
|  | results under (hopefully rare) circumstances for lengths with | |||
|  | intermediate-size prime factors (17-97).  This bug was fixed in FFTW | |||
|  | 2.1.1. | |||
|  | 
 | |||
|  | \question 05apr:mpichbug FFTW 2.1.1's MPI test programs crash with MPICH. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 2.1.2.  The 2.1/2.1.1 MPI test programs crashed | |||
|  | when using the MPICH implementation of MPI with the \courier{ch_p4\} | |||
|  | device (TCP/IP); the transforms themselves worked fine. | |||
|  | 
 | |||
|  | \question 25may:aixthreadbug FFTW 2.1.2's multi-threaded transforms don't work on AIX. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 2.1.3.  The multi-threaded transforms in | |||
|  | previous versions didn't work with AIX's \courier{pthreads\} | |||
|  | implementation, which idiosyncratically creates threads in detached | |||
|  | (non-joinable) mode by default. | |||
|  | 
 | |||
|  | \question 27sep:bigprimebug FFTW 2.1.2's complex transforms give incorrect results for large prime sizes. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 2.1.3.  FFTW's complex-transform algorithm | |||
|  | for prime sizes (in versions 2.0 to 2.1.2) had an integer overflow | |||
|  | problem that caused incorrect results for many primes greater than | |||
|  | 32768 (on 32-bit machines).  (Sizes without large prime factors are | |||
|  | not affected.) | |||
|  | 
 | |||
|  | \question 25may:solaristhreadbug FFTW 2.1.3's multi-threaded transforms don't give any speedup on Solaris. | |||
|  | 
 | |||
|  | This bug was fixed in FFTW 2.1.4.  (By default, Solaris creates | |||
|  | threads that do not parallelize over multiple processors, so one has | |||
|  | to request the proper behavior specifically.) | |||
|  | 
 | |||
|  | \question 03may:aixflags FFTW 2.1.3 crashes on AIX. | |||
|  | 
 | |||
|  | The FFTW 2.1.3 \courier{configure\} script picked incorrect compiler | |||
|  | flags for the \courier{xlc\} compiler on newer IBM processors.  This | |||
|  | is fixed in FFTW 2.1.4. | |||
|  | 
 | |||
|  | \comment Here it ends! | |||
|  | 
 |